{"version":1,"kind":"Article","sha256":"","slug":"181","location":"","dependencies":[],"doi":"10.54294/xjdr5f","frontmatter":{"title":"Implementation of a 3D thinning algorithm","abstract":"ITK currently comes with a 2D binary thinning (skeletonisation) method, but does not support 3D or higher. This paper documents a new itkBinaryThinningImageFilter3D and recommends to rename the current filter as itkBinaryThinningImageFilter2D.\r\n\r\nThe 3D method suggested here is a direct implementation of the work of Lee et al. [2] who have demonstrated that their algorithm can find all deletable surface points at every iteration and is thus very fast. The code was tested on six clinical datasets.","license":"You are licensing your work to Kitware Inc. under the\nCreative Commons Attribution License Version 3.0.\n\nKitware Inc. agrees to the following:\n\nKitware is free\n * to copy, distribute, display, and perform the work\n * to make derivative works\n * to make commercial use of the work\n\nUnder the following conditions:\n\\\"by Attribution\\\" - Kitware must attribute the work in the manner specified by the author or licensor.\n\n * For any reuse or distribution, they must make clear to others the license terms of this work.\n * Any of these conditions can be waived if they get permission from the copyright holder.\n\nYour fair use and other rights are in no way affected by the above.\n\nThis is a human-readable summary of the Legal Code (the full license) available at\nhttp://creativecommons.org/licenses/by/3.0/legalcode","keywords":["skeletonization","3D thinning"],"authors":[{"name":"Homann, Hanno","email":"hanno.homann@freenet.de","affiliations":["Oxford University"],"corresponding":true}],"date_submitted":"2007-10-12T06:26:27Z","external_publication_id":181,"revision_cids":["bafkreihhfm7kfi5nyey2riajm6aiqp4biexzs5mnd5dkllbzlgb43nlmlq"]},"mdast":{"type":"root"},"downloads":[{"url":"https://pub.desci.com/ipfs/bafkreiflozddepfd34suxrvumwwc5dtf5e2n4zyvj35yhx2q5w7gv6ks4q","title":"root/code/ITKbinaryThinningImageFilter3D.pdf","filename":"ITKbinaryThinningImageFilter3D.pdf","extra":{"size_bytes":143333,"type":"file"}},{"url":"https://pub.desci.com/ipfs/bafkreiez3ekjtpbadhcb7blppr2wxgxbuwurol5l3rppejcl7pjhbqtciy","title":"root/code/ITKbinaryThinningImageFilter3D.tex","filename":"ITKbinaryThinningImageFilter3D.tex","extra":{"size_bytes":9090,"type":"file"}},{"url":"https://pub.desci.com/ipfs/bafkreidvlwgy6m5dkfqhg4j5j2ent3fcmvngxsg4yma7jfqvttnfjisgfe","title":"root/code/InsightJournal.bib","filename":"InsightJournal.bib","extra":{"size_bytes":2039,"type":"file"}},{"url":"https://pub.desci.com/ipfs/bafybeidmzpncqbd4tcyybdk7zhhppy62c2jl2qzomy43d5cjj2ytkibj5q","title":"root/code/lee94 - 3dskeleton.pdf","filename":"lee94 - 3dskeleton.pdf","extra":{"size_bytes":1403205,"type":"file"}},{"url":"https://pub.desci.com/ipfs/bafkreiezpj7mir43imvvdefsghv56qxzpnrgyb73dy2tj57b37ae5gfwbm","title":"root/code/images/segmentation.png","filename":"segmentation.png","extra":{"size_bytes":52201,"type":"file"}},{"url":"https://pub.desci.com/ipfs/bafkreid67wsqxaqqcwe2b5b5lxnxobzlcahhx265cfu6hrwy3tuino2wdi","title":"root/code/images/skeleton.png","filename":"skeleton.png","extra":{"size_bytes":3449,"type":"file"}},{"url":"https://pub.desci.com/ipfs/bafkreicttahryldmeutzvfgossx6easn3fr7w3bzsje7ebryergthby27y","title":"root/code/Source/BinaryThinning3D.cxx","filename":"BinaryThinning3D.cxx","extra":{"size_bytes":1991,"type":"file"}},{"url":"https://pub.desci.com/ipfs/bafkreiedfadg5pvud2npb7qgu3gnaj3fmds6pl35lwi26xikijgyjeeqyi","title":"root/code/Source/CMakeLists.txt","filename":"CMakeLists.txt","extra":{"size_bytes":597,"type":"file"}},{"url":"https://pub.desci.com/ipfs/bafkreigycembjx55zwfcjixsdcshzwttnfaxdjyg2bh7oxgnf7vznqzioa","title":"root/code/Source/IJMacros.txt","filename":"IJMacros.txt","extra":{"size_bytes":3278,"type":"file"}},{"url":"https://pub.desci.com/ipfs/bafkreieocmiymztrdyj6667app4sssde3oljebksyeenvsqky3acthc3vm","title":"root/code/Source/img_in.dcm","filename":"img_in.dcm","extra":{"size_bytes":321202,"type":"file"}},{"url":"https://pub.desci.com/ipfs/bafkreibjycxdxickyhuafbzi7nwrgtknzu3muy32ca3fgoumh5az65zjfq","title":"root/code/Source/img_out.dcm","filename":"img_out.dcm","extra":{"size_bytes":321202,"type":"file"}},{"url":"https://pub.desci.com/ipfs/bafkreicnmgjcwof3uu66npzdzvdbjrx22qnuwjskcb7wfaib7pwjy6maaa","title":"root/code/Source/itkBinaryThinningImageFilter3D.h","filename":"itkBinaryThinningImageFilter3D.h","extra":{"size_bytes":5545,"type":"file"}},{"url":"https://pub.desci.com/ipfs/bafkreihsa6iyytdjajzqxdaauv34cjezfxg4eoc4oxupxmo2zpfkuyhlya","title":"root/code/Source/itkBinaryThinningImageFilter3D.txx","filename":"itkBinaryThinningImageFilter3D.txx","extra":{"size_bytes":23817,"type":"file"}},{"url":"https://ipfs.desci.com/ipfs/bafkreid5vb32cb2kczulxtxb7wue5ysp3jvoso4kaubo4bdsvxowwb2njm","title":"root/insight-journal-metadata.json","filename":"insight-journal-metadata.json","extra":{"size_bytes":3220,"type":"file"}},{"url":"https://ipfs.desci.com/ipfs/bafkreibz44xniuau6lcw3fl5hs2lfhbnqw4mjy7x2ujsojsjd2u5zggkym","title":"root/comments.md","filename":"comments.md","extra":{"size_bytes":280,"type":"file"}}],"references":{"cite":{"order":[]},"data":{}}}