{"version":1,"kind":"Article","sha256":"","slug":"10","location":"","dependencies":[],"doi":"10.54294/c8kelc","frontmatter":{"title":"The Role of Open-Source Software in the Study of Embryogenesis","abstract":"This paper focuses on the important role of open-source software in the development of a fully-automatic and accurate registration system for images of Quadrature Tomographic Microscopy. The system is correspondence-based, using the framework provided by open-source RGRL(Rensselear Generalized Registration Library). The library implements several well-known techniques and the ability to mix-and-match techniques for components of the framework allows testing of ideas and\r\ndevelopment of the robust system in a timely fashion.","license":"You are licensing your work to Kitware Inc. under the\nCreative Commons Attribution License Version 3.0.\n\nKitware Inc. agrees to the following:\n\nKitware is free\n * to copy, distribute, display, and perform the work\n * to make derivative works\n * to make commercial use of the work\n\nUnder the following conditions:\n\\\"by Attribution\\\" - Kitware must attribute the work in the manner specified by the author or licensor.\n\n * For any reuse or distribution, they must make clear to others the license terms of this work.\n * Any of these conditions can be waived if they get permission from the copyright holder.\n\nYour fair use and other rights are in no way affected by the above.\n\nThis is a human-readable summary of the Legal Code (the full license) available at\nhttp://creativecommons.org/licenses/by/3.0/legalcode","keywords":["Quadrature Tomographic Microscopy","Registration","embryogenesis"],"authors":[{"name":"Tsai, Chia-Ling","email":"tsaic@cs.ccu.edu.tw","affiliations":["National Chung Cheng University, Taiwan"],"corresponding":true}],"date_submitted":"2005-07-25T16:03:43Z","external_publication_id":10,"revision_cids":["bafkreif3plytsqcnuyfjuhlpfg2um5dbobyv2njpqpcx4arel4pkuvgeyu"]},"mdast":{"type":"root"},"downloads":[{"url":"https://ipfs.desci.com/ipfs/bafkreia5xoboevnlualwax5be2wk6fl3tufvs3x2dub6tsjovfqhgcwd3a","title":"root/insight-journal-metadata.json","filename":"insight-journal-metadata.json","extra":{"size_bytes":4635,"type":"file"}},{"url":"https://dweb.link/ipfs/bafybeifrq6agqtqbhhmfjve7we4wglgkce7gpexdxhltj7zyumhk3yjc7u","title":"root/article.pdf","filename":"article.pdf","extra":{"size_bytes":532031,"type":"file"}}],"references":{"cite":{"order":["ref1","ref2","ref3","ref4","ref5","ref6","ref7"]},"data":{"ref1":{"label":"ref1","enumerator":"1","url":"https://doi.org/10.1023/b:visi.0000029664.99615.94","html":"Distinctive image features from scale-invariant keypoints+IJCV+60+2+91+110+November 2004+D. G. Lowe"},"ref2":{"label":"ref2","enumerator":"2","url":"https://doi.org/10.1109/tmi.2003.819276","html":"The dual-bootstrap iterative closest point algorithm with application to retinal image registration+IEEE Trans. Med+22+11+1379+1394+2003+C. Stewart+B. C.-L. Tsai+Roysam"},"ref3":{"label":"ref3","enumerator":"3","url":"https://doi.org/10.1007/978-3-540-30135-6_106","html":"An uncertainty-driven hybrid of intensitybased and feature-based registration with application to retinal and lung CT images+In Proc. 7th MICCAI+2004+C. V. Stewart+Y.-L. Lee+C.-L. Tsai+Saint-Malo"},"ref4":{"label":"ref4","enumerator":"4","url":"https://doi.org/10.1007/978-3-540-45087-0_40","html":"A view-based approach to registration: Theory and application to vascular image registration+In Proc. IPMI+20+2003+C. V. Stewart+C.-L. Tsai+A. Perera"},"ref5":{"label":"ref5","enumerator":"5","html":"[5] The TargetJr Consortium. The VXL Book+2000"},"ref6":{"label":"ref6","enumerator":"6","url":"https://doi.org/10.1117/12.591341","html":"Multimodal optical microscope for imaging biological systems+In Proc. SPIE Conference 3D, Mult. Micro. Image Acqu. Pro. XII+5701+136+145+2005+D. Townsend+G. L. C. DiMarzio+M. Rajadhyaksha"},"ref7":{"label":"ref7","enumerator":"7","url":"https://doi.org/10.1007/11566489_115","html":"Accurate image registration for quadrature tomographic microscopy+In Proc. 8th MICCAI+200+W. C.-L. Tsai+C. Warger+DiMarzio"}}}}